Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas cavernicola |
| Strain | strain K1S02-6 Segkk7 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1128932 bp
Thymine Count
1085483 bp
Guanine Count
1666656 bp
Cytosine Count
1745353 bp
Genome Length
5626424 bp
Protein-coding Genes
4762 genes
Non-Coding Genes
180 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i-c crispr-associated protein cas8c/csd1 | D3879_02350 | Not Available | Negative | 507030 - 508820 | 65467.0 |
| type i-c crispr-associated protein cas5 | D3879_02355 | Not Available | Negative | 508817 - 509491 | 25337.4 |
| crispr-associated endonuclease cas3'' | D3879_02360 | Not Available | Negative | 509547 - 511772 | 81502.6 |
| duf2384 domain-containing protein | D3879_02370 | Not Available | Positive | 512010 - 512498 | 17745.2 |
| hypothetical protein | D3879_02375 | Not Available | Positive | 512914 - 513387 | 17466.7 |
| hypothetical protein | D3879_02380 | Not Available | Negative | 513745 - 514215 | 18237.1 |
| integrase | D3879_02385 | Not Available | Negative | 514224 - 516284 | 76099.7 |
| site-specific integrase | D3879_02390 | Not Available | Negative | 516277 - 517815 | 57746.3 |
| site-specific integrase | D3879_02395 | Not Available | Negative | 517802 - 519100 | 49009.6 |
| single-stranded dna-binding protein | D3879_02400 | Not Available | Negative | 519231 - 519734 | 18651.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.





