Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas cavernicola |
| Strain | strain K1S02-6 Segkk7 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1128932 bp
Thymine Count
1085483 bp
Guanine Count
1666656 bp
Cytosine Count
1745353 bp
Genome Length
5626424 bp
Protein-coding Genes
4762 genes
Non-Coding Genes
180 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiopurine s-methyltransferase | D3879_23125 | Not Available | Positive | 4907995 - 4908654 | 24984.0 |
| protease htpx | D3879_23130 | Not Available | Negative | 4908773 - 4909645 | 31888.3 |
| hypothetical protein | D3879_23135 | Not Available | Negative | 4909736 - 4910188 | 16811.0 |
| pyridoxal phosphate-dependent aminotransferase | D3879_23140 | Not Available | Negative | 4910222 - 4911433 | 44786.0 |
| peptide-methionine (r)-s-oxide reductase | D3879_23145 | Not Available | Positive | 4911611 - 4912006 | 14579.1 |
| glutathione peroxidase | D3879_23150 | Not Available | Positive | 4912123 - 4912608 | 17649.4 |
| marr family transcriptional regulator | D3879_23155 | Not Available | Positive | 4912614 - 4913084 | 17399.6 |
| response regulator | D3879_23160 | Not Available | Negative | 4913068 - 4915389 | 84262.8 |
| atp-binding protein | D3879_23165 | Not Available | Positive | 4915494 - 4916384 | 33383.8 |
| gaf domain-containing protein | D3879_23170 | Not Available | Positive | 4916381 - 4916863 | 17296.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.





