Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas cavernicola |
| Strain | strain K1S02-6 Segkk7 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1128932 bp
Thymine Count
1085483 bp
Guanine Count
1666656 bp
Cytosine Count
1745353 bp
Genome Length
5626424 bp
Protein-coding Genes
4762 genes
Non-Coding Genes
180 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleotide exchange factor grpe | D3879_21275 | Not Available | Negative | 4504392 - 4504961 | 20980.7 |
| dna repair protein recn | D3879_21280 | Not Available | Positive | 4505115 - 4506791 | 60697.6 |
| ferric iron uptake transcriptional regulator | D3879_21285 | Not Available | Negative | 4506887 - 4507291 | 15248.3 |
| outer membrane protein assembly factor bame | D3879_21290 | Not Available | Positive | 4507389 - 4507916 | 19143.9 |
| rnfh family protein | D3879_21295 | Not Available | Negative | 4507979 - 4508299 | 11488.9 |
| type ii toxin-antitoxin system rata family toxin | D3879_21300 | Not Available | Negative | 4508292 - 4508726 | 16175.3 |
| ssra-binding protein smpb | D3879_21310 | Not Available | Positive | 4510440 - 4510922 | 18365.3 |
| fcd domain-containing protein | D3879_21315 | Not Available | Negative | 4511008 - 4511775 | 28434.9 |
| l-lactate permease | D3879_21320 | Not Available | Positive | 4512096 - 4513784 | 58961.0 |
| (fe-s)-binding protein | D3879_21325 | Not Available | Positive | 4514023 - 4514847 | 30175.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.





