Pseudomonas cavernicola strain K1S02-6 Segkk7

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas cavernicola strain K1S02-6 Segkk7 is characterized by having a single replicon, which is indicative of its genetic organization and stability. The strain is cataloged under the accession number QYUR00000000.1, providing a reference for researchers interested in its genomic information. Pseudomonas species are known for their metabolic diversity and ability to thrive in various environments, including extreme conditions. While specific phenotypic traits of strain K1S02-6 Segkk7 are not detailed here, the general characteristics of the Pseudomonas genus suggest potential for biotechnological applications, including bioremediation and bioaugmentation. The presence of a single replicon may suggest a streamlined genomic architecture, possibly facilitating efficient replication and expression of essential genes. This could be particularly advantageous in its native habitat, potentially allowing for rapid adaptation to environmental changes or stressors. From an ecological perspective, the capabilities of Pseudomonas cavernicola strain K1S02-6 Segkk7 may contribute to nutrient cycling within its ecosystem, aiding in the decomposition of organic materials and influencing microbial community dynamics. Understanding the functional roles of such strains can provide insights into their importance in natural biogeochemical processes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas cavernicola
Strainstrain K1S02-6 Segkk7

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas cavernicola strain K1S02-6 Segkk7
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas cavernicola strain K1S02-6 Segkk7, whole genome

Gene Summary

Adenine Count

1128932 bp

Thymine Count

1085483 bp

Guanine Count

1666656 bp

Cytosine Count

1745353 bp

Genome Length

5626424 bp

Protein-coding Genes

4762 genes

Non-Coding Genes

180 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
atp-dependent zinc metalloprotease ftshD3879_21225Not AvailableNegative4491575 - 449349169737.5
23s rrna (uridine(2552)-2'-o)-methyltransferase rlmeD3879_21230Not AvailableNegative4493703 - 449433823526.4
ribosome assembly rna-binding protein yhbyD3879_21235Not AvailablePositive4494442 - 449475011509.2
duf4149 domain-containing proteinD3879_21240Not AvailableNegative4494769 - 449522416719.1
transcription elongation factor greaD3879_21245Not AvailableNegative4495202 - 449567817406.8
carbamoyl-phosphate synthase large subunitD3879_21250Not AvailableNegative4495675 - 4498896117683.0
carbamoyl-phosphate synthase small subunitD3879_21255Not AvailableNegative4498933 - 450006940613.5
4-hydroxy-tetrahydrodipicolinate reductaseD3879_21260Not AvailableNegative4500264 - 450106728179.0
molecular chaperone dnajD3879_21265Not AvailableNegative4501110 - 450224040296.7
molecular chaperone dnakD3879_21270Not AvailableNegative4502363 - 450427968753.9

Displaying genes 4071 – 4080 of 4942 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.