Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas cavernicola |
| Strain | strain K1S02-6 Segkk7 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1128932 bp
Thymine Count
1085483 bp
Guanine Count
1666656 bp
Cytosine Count
1745353 bp
Genome Length
5626424 bp
Protein-coding Genes
4762 genes
Non-Coding Genes
180 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peroxide stress protein yaaa | D3879_20170 | Not Available | Positive | 4270516 - 4271295 | 29532.2 |
| udp-glucose/gdp-mannose dehydrogenase family protein | D3879_20175 | Not Available | Positive | 4272074 - 4273384 | 47526.3 |
| glycosyltransferase family 2 protein | D3879_20180 | Not Available | Positive | 4273547 - 4275028 | 55976.8 |
| alginate biosynthesis protein alg44 | D3879_20185 | Not Available | Positive | 4275074 - 4276243 | 41948.4 |
| right-handed parallel beta-helix repeat-containing protein | D3879_20200 | Not Available | Positive | 4279187 - 4280797 | 59815.2 |
| alginate o-acetyltransferase | D3879_20205 | Not Available | Positive | 4280812 - 4282251 | 52996.2 |
| mannuronate-specific alginate lyase | D3879_20210 | Not Available | Positive | 4282266 - 4283381 | 41789.4 |
| duf1534 domain-containing protein | D3879_20215 | Not Available | Positive | 4283394 - 4283516 | 4219.05 |
| mboat family protein | D3879_20220 | Not Available | Positive | 4283765 - 4285303 | 57918.6 |
| alginate o-acetyltransferase | D3879_20225 | Not Available | Positive | 4285316 - 4286494 | 43664.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.





