Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas cavernicola |
| Strain | strain K1S02-6 Segkk7 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1128932 bp
Thymine Count
1085483 bp
Guanine Count
1666656 bp
Cytosine Count
1745353 bp
Genome Length
5626424 bp
Protein-coding Genes
4762 genes
Non-Coding Genes
180 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinyl-diaminopimelate desuccinylase | D3879_19295 | Not Available | Positive | 4083812 - 4084963 | 40931.8 |
| methyltransferase domain-containing protein | D3879_19300 | Not Available | Positive | 4084963 - 4085769 | 29813.7 |
| hypothetical protein | D3879_19305 | Not Available | Positive | 4085849 - 4086232 | 14058.2 |
| cold shock domain-containing protein | D3879_19310 | Not Available | Negative | 4086532 - 4086741 | 7715.89 |
| duf4340 domain-containing protein | D3879_19315 | Not Available | Negative | 4086976 - 4087959 | 36237.9 |
| abc transporter | D3879_19320 | Not Available | Negative | 4087975 - 4089813 | 68141.1 |
| abc transporter permease | D3879_19325 | Not Available | Negative | 4089824 - 4090558 | 26686.2 |
| abc transporter atp-binding protein | D3879_19330 | Not Available | Negative | 4090555 - 4091493 | 33763.9 |
| hypothetical protein | D3879_19335 | Not Available | Negative | 4091696 - 4092154 | 15717.9 |
| glycerol-3-phosphate 1-o-acyltransferase plsb | D3879_19340 | Not Available | Positive | 4092408 - 4094891 | 93855.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.





