Pseudomonas cavernicola strain K1S02-6 Segkk7

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas cavernicola strain K1S02-6 Segkk7 is characterized by having a single replicon, which is indicative of its genetic organization and stability. The strain is cataloged under the accession number QYUR00000000.1, providing a reference for researchers interested in its genomic information. Pseudomonas species are known for their metabolic diversity and ability to thrive in various environments, including extreme conditions. While specific phenotypic traits of strain K1S02-6 Segkk7 are not detailed here, the general characteristics of the Pseudomonas genus suggest potential for biotechnological applications, including bioremediation and bioaugmentation. The presence of a single replicon may suggest a streamlined genomic architecture, possibly facilitating efficient replication and expression of essential genes. This could be particularly advantageous in its native habitat, potentially allowing for rapid adaptation to environmental changes or stressors. From an ecological perspective, the capabilities of Pseudomonas cavernicola strain K1S02-6 Segkk7 may contribute to nutrient cycling within its ecosystem, aiding in the decomposition of organic materials and influencing microbial community dynamics. Understanding the functional roles of such strains can provide insights into their importance in natural biogeochemical processes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas cavernicola
Strainstrain K1S02-6 Segkk7

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas cavernicola strain K1S02-6 Segkk7
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas cavernicola strain K1S02-6 Segkk7, whole genome

Gene Summary

Adenine Count

1128932 bp

Thymine Count

1085483 bp

Guanine Count

1666656 bp

Cytosine Count

1745353 bp

Genome Length

5626424 bp

Protein-coding Genes

4762 genes

Non-Coding Genes

180 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
atpaseD3879_15120Not AvailableNegative3215313 - 321572915718.9
1-aminocyclopropane-1-carboxylate deaminaseD3879_15125Not AvailableNegative3215917 - 321693036875.3
duf4242 domain-containing proteinD3879_15130Not AvailableNegative3217390 - 32176298941.6
error-prone dna polymeraseD3879_15135Not AvailableNegative3218964 - 3222041115265.0
dna polymerase y family proteinD3879_15140Not AvailableNegative3222181 - 322359653139.2
translesion dna synthesis-associated protein imuaD3879_15145Not AvailableNegative3223604 - 322422421981.6
protocatechuate 3,4-dioxygenase subunit alphaD3879_15150Not AvailableNegative3224798 - 322540322346.4
protocatechuate 3,4-dioxygenase subunit betaD3879_15155Not AvailableNegative3225416 - 322613526871.0
pca operon transcription factor pcaqD3879_15160Not AvailableNegative3226253 - 322718233684.0
helix-turn-helix domain-containing proteinD3879_15165Not AvailableNegative3227453 - 322832232735.6

Displaying genes 2941 – 2950 of 4942 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.