Pseudomonas cavernicola strain K1S02-6 Segkk7

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas cavernicola strain K1S02-6 Segkk7 is characterized by having a single replicon, which is indicative of its genetic organization and stability. The strain is cataloged under the accession number QYUR00000000.1, providing a reference for researchers interested in its genomic information. Pseudomonas species are known for their metabolic diversity and ability to thrive in various environments, including extreme conditions. While specific phenotypic traits of strain K1S02-6 Segkk7 are not detailed here, the general characteristics of the Pseudomonas genus suggest potential for biotechnological applications, including bioremediation and bioaugmentation. The presence of a single replicon may suggest a streamlined genomic architecture, possibly facilitating efficient replication and expression of essential genes. This could be particularly advantageous in its native habitat, potentially allowing for rapid adaptation to environmental changes or stressors. From an ecological perspective, the capabilities of Pseudomonas cavernicola strain K1S02-6 Segkk7 may contribute to nutrient cycling within its ecosystem, aiding in the decomposition of organic materials and influencing microbial community dynamics. Understanding the functional roles of such strains can provide insights into their importance in natural biogeochemical processes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas cavernicola
Strainstrain K1S02-6 Segkk7

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas cavernicola strain K1S02-6 Segkk7
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas cavernicola strain K1S02-6 Segkk7, whole genome

Gene Summary

Adenine Count

1128932 bp

Thymine Count

1085483 bp

Guanine Count

1666656 bp

Cytosine Count

1745353 bp

Genome Length

5626424 bp

Protein-coding Genes

4762 genes

Non-Coding Genes

180 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
rod shape-determining protein mrecD3879_00850Not AvailableNegative177050 - 17804835963.6
rod shape-determining proteinD3879_00855Not AvailableNegative178252 - 17929237172.9
asp-trna(asn)/glu-trna(gln) amidotransferase subunit gatcD3879_00860Not AvailablePositive179518 - 17980510516.6
asp-trna(asn)/glu-trna(gln) amidotransferase subunit gataD3879_00865Not AvailablePositive179820 - 18127151753.6
asp-trna(asn)/glu-trna(gln) amidotransferase subunit gatbD3879_00870Not AvailablePositive181382 - 18282752857.1
septal ring lytic transglycosylase rlpa family proteinD3879_00875Not AvailablePositive182972 - 18336414013.8
sodium:calcium antiporterD3879_00880Not AvailablePositive183467 - 18457939024.9
4-carboxymuconolactone decarboxylaseD3879_00885Not AvailablePositive184572 - 18495513878.5
Ncrna_class:srp_rnaNot AvailableNot AvailablePositive185813 - 185909Not Available
aec family transporterD3879_00890Not AvailableNegative185006 - 18594732996.3

Displaying genes 281 – 290 of 4942 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.