Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas cavernicola |
| Strain | strain K1S02-6 Segkk7 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1128932 bp
Thymine Count
1085483 bp
Guanine Count
1666656 bp
Cytosine Count
1745353 bp
Genome Length
5626424 bp
Protein-coding Genes
4762 genes
Non-Coding Genes
180 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| biphenyl 2,3-dioxygenase | D3879_14300 | Not Available | Negative | 3071379 - 3072278 | 33562.9 |
| duf3300 domain-containing protein | D3879_14325 | Not Available | Negative | 3076003 - 3076971 | 35499.0 |
| two pore domain potassium channel family protein | D3879_14330 | Not Available | Positive | 3076904 - 3077362 | 16967.8 |
| chad domain-containing protein | D3879_14335 | Not Available | Negative | 3077424 - 3078197 | 28937.1 |
| ornithine decarboxylase spef | D3879_14340 | Not Available | Positive | 3078480 - 3080660 | 81253.9 |
| arginine decarboxylase | D3879_14345 | Not Available | Positive | 3080821 - 3083121 | 84473.8 |
| putrescine-ornithine antiporter | D3879_14350 | Not Available | Positive | 3083203 - 3084537 | 46338.5 |
| amino acid abc transporter substrate-binding protein | D3879_14355 | Not Available | Positive | 3084585 - 3085490 | 32653.6 |
| helix-turn-helix transcriptional regulator | D3879_14360 | Not Available | Negative | 3085601 - 3088132 | 94060.8 |
| duf1329 domain-containing protein | D3879_14365 | Not Available | Negative | 3088263 - 3089636 | 50554.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.





