Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas cavernicola |
| Strain | strain K1S02-6 Segkk7 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1128932 bp
Thymine Count
1085483 bp
Guanine Count
1666656 bp
Cytosine Count
1745353 bp
Genome Length
5626424 bp
Protein-coding Genes
4762 genes
Non-Coding Genes
180 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| agmatine deiminase family protein | D3879_12835 | Not Available | Negative | 2762252 - 2763376 | 40470.3 |
| extracellular solute-binding protein | D3879_12840 | Not Available | Negative | 2763544 - 2764647 | 40420.5 |
| n-carbamoylputrescine amidase | D3879_12845 | Not Available | Negative | 2764650 - 2765558 | 33405.0 |
| agmatine deiminase family protein | D3879_12850 | Not Available | Negative | 2765563 - 2766615 | 38251.3 |
| lysr family transcriptional regulator | D3879_12855 | Not Available | Positive | 2766748 - 2767617 | 32393.4 |
| long-chain fatty acid--coa ligase | D3879_12860 | Not Available | Negative | 2767672 - 2769360 | 61601.3 |
| long-chain-fatty-acid--coa ligase | D3879_12865 | Not Available | Negative | 2769600 - 2771288 | 61532.0 |
| alpha/beta hydrolase | D3879_12870 | Not Available | Positive | 2771560 - 2772519 | 35845.7 |
| 3-hydroxybutyryl-coa dehydratase | D3879_12875 | Not Available | Positive | 2772516 - 2772986 | 17044.5 |
| hlyd family secretion protein | D3879_12880 | Not Available | Negative | 2773105 - 2773992 | 32403.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.





