Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas cavernicola |
| Strain | strain K1S02-6 Segkk7 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1128932 bp
Thymine Count
1085483 bp
Guanine Count
1666656 bp
Cytosine Count
1745353 bp
Genome Length
5626424 bp
Protein-coding Genes
4762 genes
Non-Coding Genes
180 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| s9 family peptidase | D3879_11995 | Not Available | Positive | 2593873 - 2595906 | 74735.5 |
| phosphotyrosine protein phosphatase | D3879_12000 | Not Available | Positive | 2596017 - 2596340 | 12411.3 |
| eal domain-containing protein | D3879_12005 | Not Available | Negative | 2596394 - 2598910 | 93488.7 |
| hypothetical protein | D3879_12010 | Not Available | Positive | 2599725 - 2600405 | 24410.6 |
| hnh nuclease family protein | D3879_12015 | Not Available | Positive | 2600733 - 2601104 | 14086.2 |
| trmh family rna methyltransferase | D3879_12020 | Not Available | Positive | 2601227 - 2601700 | 17276.8 |
| lyse family translocator | D3879_12025 | Not Available | Negative | 2601843 - 2602472 | 21990.4 |
| extracellular solute-binding protein | D3879_12030 | Not Available | Negative | 2602830 - 2603924 | 39792.2 |
| agmatine deiminase | D3879_12035 | Not Available | Negative | 2603937 - 2605064 | 41788.0 |
| lysr family transcriptional regulator | D3879_12040 | Not Available | Negative | 2605165 - 2606052 | 32331.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.





