Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas cavernicola |
| Strain | strain K1S02-6 Segkk7 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1128932 bp
Thymine Count
1085483 bp
Guanine Count
1666656 bp
Cytosine Count
1745353 bp
Genome Length
5626424 bp
Protein-coding Genes
4762 genes
Non-Coding Genes
180 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| retention module-containing protein | D3879_11775 | Not Available | Negative | 2538229 - 2545443 | 242477.0 |
| channel protein tolc | D3879_11780 | Not Available | Positive | 2545903 - 2547258 | 50275.2 |
| type i secretion system permease/atpase | D3879_11785 | Not Available | Positive | 2547300 - 2549459 | 78342.3 |
| hlyd family type i secretion periplasmic adaptor subunit | D3879_11790 | Not Available | Positive | 2549470 - 2550828 | 50208.3 |
| dtw domain-containing protein | D3879_11795 | Not Available | Negative | 2551046 - 2551651 | 21585.5 |
| methyl-accepting chemotaxis protein | D3879_11800 | Not Available | Positive | 2551948 - 2553570 | 59156.1 |
| lysr family transcriptional regulator | D3879_11805 | Not Available | Negative | 2553800 - 2554693 | 33367.2 |
| agmatinase | D3879_11810 | Not Available | Positive | 2555006 - 2555965 | 34663.0 |
| duf4440 domain-containing protein | D3879_11815 | Not Available | Positive | 2555962 - 2556366 | 15169.7 |
| cytosine permease | D3879_11820 | Not Available | Positive | 2556396 - 2557919 | 54022.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.





