Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas cavernicola |
| Strain | strain K1S02-6 Segkk7 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1128932 bp
Thymine Count
1085483 bp
Guanine Count
1666656 bp
Cytosine Count
1745353 bp
Genome Length
5626424 bp
Protein-coding Genes
4762 genes
Non-Coding Genes
180 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ykgj family cysteine cluster protein | D3879_06325 | Not Available | Positive | 1359190 - 1359543 | 13229.0 |
| asnc family transcriptional regulator | D3879_06330 | Not Available | Negative | 1359610 - 1360098 | 18874.0 |
| d-amino acid dehydrogenase | D3879_06335 | Not Available | Positive | 1360254 - 1361552 | 47188.8 |
| rida family protein | D3879_06340 | Not Available | Positive | 1361527 - 1361880 | 12734.2 |
| alanine racemase | D3879_06345 | Not Available | Positive | 1362002 - 1363075 | 38920.2 |
| cupin domain-containing protein | D3879_06350 | Not Available | Positive | 1363177 - 1363725 | 19837.6 |
| cytochrome c5 family protein | D3879_06355 | Not Available | Positive | 1363870 - 1364295 | 14034.1 |
| xanthine phosphoribosyltransferase | D3879_06360 | Not Available | Negative | 1364393 - 1364965 | 20832.5 |
| dna helicase rep | D3879_06365 | Not Available | Negative | 1365057 - 1367066 | 76569.9 |
| bifunctional diguanylate cyclase/phosphodiesterase | D3879_06370 | Not Available | Positive | 1367344 - 1369017 | 61979.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.





