Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter rubripertinctus |
| Strain | strain CCM 8852 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
976622 bp
Thymine Count
975089 bp
Guanine Count
1572314 bp
Cytosine Count
1575162 bp
Genome Length
5099443 bp
Protein-coding Genes
4242 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3108 domain-containing protein | D0T11_00085 | Not Available | Positive | 25262 - 26086 | 31612.8 |
| dna-binding response regulator | D0T11_00090 | Not Available | Positive | 26158 - 27093 | 34849.3 |
| ghkl domain-containing protein | D0T11_00095 | Not Available | Positive | 27210 - 28295 | 41373.7 |
| rlua family pseudouridine synthase | D0T11_00100 | Not Available | Positive | 28338 - 29051 | 27149.7 |
| hypothetical protein | D0T11_00105 | Not Available | Negative | 29074 - 30537 | 54189.5 |
| 50s ribosomal protein l13 | D0T11_00110 | Not Available | Positive | 30728 - 31180 | 16596.8 |
| 30s ribosomal protein s9 | D0T11_00115 | Not Available | Positive | 31220 - 31606 | 14343.4 |
| 30s ribosomal protein s2 | D0T11_00120 | Not Available | Positive | 31627 - 32394 | 28582.7 |
| elongation factor ts | D0T11_00125 | Not Available | Positive | 32617 - 33456 | 29980.1 |
| hypothetical protein | D0T11_00130 | Not Available | Negative | 33567 - 34193 | 23508.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
