Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter rubripertinctus |
| Strain | strain CCM 8852 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
976622 bp
Thymine Count
975089 bp
Guanine Count
1572314 bp
Cytosine Count
1575162 bp
Genome Length
5099443 bp
Protein-coding Genes
4242 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ompa family protein | D0T11_03500 | Not Available | Negative | 761089 - 761706 | 22287.4 |
| bifunctional udp-n-acetylmuramoyl-tripeptide:d-alanyl-d-alanine ligase/alanine racemase | D0T11_03505 | Not Available | Negative | 761782 - 764295 | 91673.7 |
| permease | D0T11_03510 | Not Available | Positive | 764390 - 765475 | 39150.4 |
| hypothetical protein | D0T11_03515 | Not Available | Positive | 765572 - 768178 | 94372.5 |
| 1-aminocyclopropane-1-carboxylate deaminase/d-cysteine desulfhydrase | D0T11_03520 | Not Available | Positive | 768345 - 769238 | 32376.8 |
| hypothetical protein | D0T11_03525 | Not Available | Negative | 769391 - 770539 | 43033.5 |
| duf4230 domain-containing protein | D0T11_03530 | Not Available | Positive | 770732 - 771361 | 23816.3 |
| giy-yig nuclease family protein | D0T11_03535 | Not Available | Negative | 771470 - 771772 | 11937.2 |
| recx family transcriptional regulator | D0T11_03540 | Not Available | Negative | 771911 - 772408 | 19554.5 |
| carboxypeptidase-like regulatory domain-containing protein | D0T11_03545 | Not Available | Positive | 772652 - 775306 | 98775.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
