Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter rubripertinctus |
| Strain | strain CCM 8852 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
976622 bp
Thymine Count
975089 bp
Guanine Count
1572314 bp
Cytosine Count
1575162 bp
Genome Length
5099443 bp
Protein-coding Genes
4242 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna/rna non-specific endonuclease | D0T11_02595 | Not Available | Negative | 565507 - 566949 | 50745.4 |
| hypothetical protein | D0T11_02600 | Not Available | Positive | 567124 - 567552 | 16128.1 |
| endonuclease | D0T11_02605 | Not Available | Positive | 567597 - 568610 | 37975.9 |
| hypothetical protein | D0T11_02610 | Not Available | Positive | 568787 - 569236 | 16208.6 |
| duf885 domain-containing protein | D0T11_02615 | Not Available | Positive | 569358 - 571145 | 67321.7 |
| thioredoxin | D0T11_02620 | Not Available | Positive | 571269 - 571610 | 12775.2 |
| ydcf family protein | D0T11_02625 | Not Available | Positive | 571680 - 572453 | 29033.1 |
| nad-dependent succinate-semialdehyde dehydrogenase | D0T11_02630 | Not Available | Negative | 572566 - 573930 | 49524.7 |
| sigma-70 family rna polymerase sigma factor | D0T11_02635 | Not Available | Positive | 574235 - 574801 | 21410.8 |
| anti-sigma factor | D0T11_02640 | Not Available | Positive | 574801 - 575691 | 31895.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
