Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter rubripertinctus |
| Strain | strain CCM 8852 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
976622 bp
Thymine Count
975089 bp
Guanine Count
1572314 bp
Cytosine Count
1575162 bp
Genome Length
5099443 bp
Protein-coding Genes
4242 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate aminotransferase family protein | D0T11_02280 | Not Available | Negative | 495366 - 496550 | 43169.4 |
| hypothetical protein | D0T11_02285 | Not Available | Negative | 496730 - 497215 | 18558.3 |
| hypothetical protein | D0T11_02290 | Not Available | Negative | 497275 - 497733 | 16399.7 |
| sigma-70 family rna polymerase sigma factor | D0T11_02295 | Not Available | Negative | 497875 - 498411 | 20822.9 |
| zinc ribbon domain-containing protein | D0T11_02300 | Not Available | Positive | 498678 - 499328 | 23484.5 |
| duf481 domain-containing protein | D0T11_02305 | Not Available | Negative | 499336 - 500088 | 27720.8 |
| mechanosensitive ion channel family protein | D0T11_02310 | Not Available | Positive | 500340 - 502274 | 72608.4 |
| chloride channel protein | D0T11_02315 | Not Available | Positive | 502525 - 503934 | 51709.4 |
| single-stranded dna-binding protein | D0T11_02320 | Not Available | Positive | 503993 - 504349 | 13033.6 |
| integrase | D0T11_02325 | Not Available | Positive | 504346 - 505431 | 40467.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
