Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter rubripertinctus |
| Strain | strain CCM 8852 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
976622 bp
Thymine Count
975089 bp
Guanine Count
1572314 bp
Cytosine Count
1575162 bp
Genome Length
5099443 bp
Protein-coding Genes
4242 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| repa protein | D0T11_21420 | Not Available | Positive | 5010083 - 5010652 | 22128.8 |
| rna polymerase sigma factor | D0T11_21425 | Not Available | Negative | 5010999 - 5011565 | 21425.0 |
| hypothetical protein | D0T11_21430 | Not Available | Positive | 5011894 - 5012124 | 8548.06 |
| hypothetical protein | D0T11_21435 | Not Available | Negative | 5012149 - 5012370 | 7910.31 |
| hypothetical protein | D0T11_21440 | Not Available | Positive | 5012616 - 5012903 | 10488.6 |
| hypothetical protein | D0T11_21445 | Not Available | Positive | 5013105 - 5014342 | 45982.1 |
| rhs repeat-associated core domain-containing protein | D0T11_21450 | Not Available | Negative | 5015113 - 5016969 | 68561.2 |
| hypothetical protein | D0T11_21455 | Not Available | Negative | 5017778 - 5018488 | 26946.3 |
| tn3 family transposase | D0T11_21460 | Not Available | Negative | 5018627 - 5021653 | 113587.0 |
| recombinase family protein | D0T11_21465 | Not Available | Positive | 5021821 - 5022417 | 21820.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
