Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter rubripertinctus |
| Strain | strain CCM 8852 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
976622 bp
Thymine Count
975089 bp
Guanine Count
1572314 bp
Cytosine Count
1575162 bp
Genome Length
5099443 bp
Protein-coding Genes
4242 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i-b crispr-associated endonuclease cas1 | D0T11_20905 | Not Available | Negative | 4902253 - 4903260 | 38773.9 |
| crispr-associated protein cas4 | D0T11_20910 | Not Available | Negative | 4903378 - 4903884 | 19753.7 |
| crispr-associated endonuclease cas3'' | D0T11_20915 | Not Available | Negative | 4903897 - 4906773 | 108603.0 |
| crispr-associated protein cas5 | D0T11_20920 | Not Available | Negative | 4906784 - 4907662 | 32673.7 |
| crispr-associated protein | D0T11_20925 | Not Available | Negative | 4907675 - 4908607 | 34582.1 |
| hypothetical protein | D0T11_20930 | Not Available | Negative | 4908629 - 4910347 | 66213.8 |
| hypothetical protein | D0T11_20935 | Not Available | Negative | 4910798 - 4910983 | 7223.49 |
| crispr-associated endoribonuclease cas6 | D0T11_20940 | Not Available | Negative | 4911030 - 4911695 | 24368.1 |
| transposase family protein | D0T11_20945 | Not Available | Positive | 4911829 - 4911965 | 5351.36 |
| is1 family transposase | D0T11_20950 | Not Available | Negative | 4911966 - 4912069 | 3771.59 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
