Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter rubripertinctus |
| Strain | strain CCM 8852 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
976622 bp
Thymine Count
975089 bp
Guanine Count
1572314 bp
Cytosine Count
1575162 bp
Genome Length
5099443 bp
Protein-coding Genes
4242 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-54-dependent fis family transcriptional regulator | D0T11_17155 | Not Available | Negative | 3993420 - 3994598 | 43452.6 |
| is200/is605 family transposase | D0T11_17165 | Not Available | Negative | 3995507 - 3995995 | 18241.9 |
| peptidase | D0T11_17170 | Not Available | Negative | 3996201 - 3998072 | 69627.8 |
| duf2027 domain-containing protein | D0T11_17175 | Not Available | Negative | 3998272 - 3999399 | 40734.0 |
| duf2279 domain-containing protein | D0T11_17180 | Not Available | Negative | 3999729 - 4000631 | 33698.4 |
| t9ss c-terminal target domain-containing protein | D0T11_17185 | Not Available | Positive | 4000874 - 4003702 | 103995.0 |
| n-acetylglucosamine kinase | D0T11_17190 | Not Available | Negative | 4003816 - 4004664 | 31462.0 |
| t9ss c-terminal target domain-containing protein | D0T11_17195 | Not Available | Positive | 4005020 - 4006186 | 40159.5 |
| ragb/susd family nutrient uptake outer membrane protein | D0T11_17200 | Not Available | Negative | 4006574 - 4008193 | 59963.7 |
| hypothetical protein | D0T11_17205 | Not Available | Negative | 4008206 - 4008712 | 18743.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
