Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter rubripertinctus |
| Strain | strain CCM 8852 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
976622 bp
Thymine Count
975089 bp
Guanine Count
1572314 bp
Cytosine Count
1575162 bp
Genome Length
5099443 bp
Protein-coding Genes
4242 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyltransferase | D0T11_15790 | Not Available | Negative | 3667775 - 3668650 | 30555.0 |
| sugar transferase | D0T11_15795 | Not Available | Negative | 3668491 - 3669165 | 24560.7 |
| 4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinase | D0T11_15800 | Not Available | Positive | 3669374 - 3670201 | 29438.2 |
| dmt family transporter | D0T11_15805 | Not Available | Negative | 3670221 - 3671144 | 33912.8 |
| yjgp/yjgq family permease | D0T11_15810 | Not Available | Negative | 3671231 - 3672307 | 40499.8 |
| trna guanosine(34) transglycosylase tgt | D0T11_15815 | Not Available | Negative | 3672418 - 3673548 | 42128.8 |
| glycosyltransferase | D0T11_15820 | Not Available | Positive | 3673683 - 3674840 | 43264.4 |
| sigma-70 family rna polymerase sigma factor | D0T11_15825 | Not Available | Positive | 3674831 - 3675448 | 24043.0 |
| 16s rrna (guanine(527)-n(7))-methyltransferase rsmg | D0T11_15830 | Not Available | Positive | 3675589 - 3676209 | 23364.9 |
| hypothetical protein | D0T11_15835 | Not Available | Positive | 3676362 - 3676706 | 12833.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
