Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter rubripertinctus |
| Strain | strain CCM 8852 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
976622 bp
Thymine Count
975089 bp
Guanine Count
1572314 bp
Cytosine Count
1575162 bp
Genome Length
5099443 bp
Protein-coding Genes
4242 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is3 family transposase | D0T11_15140 | Not Available | Negative | 3512510 - 3513412 | 34452.2 |
| hypothetical protein | D0T11_15145 | Not Available | Negative | 3513409 - 3513693 | 10579.8 |
| t9ss c-terminal target domain-containing protein | D0T11_15150 | Not Available | Positive | 3513931 - 3514236 | 11296.3 |
| duf4175 family protein | D0T11_15155 | Not Available | Positive | 3514597 - 3518031 | 131623.0 |
| atp-binding protein | D0T11_15160 | Not Available | Positive | 3518083 - 3518535 | 16693.6 |
| rrna maturation rnase ybey | D0T11_15165 | Not Available | Positive | 3518607 - 3519089 | 18358.3 |
| gnat family n-acetyltransferase | D0T11_15170 | Not Available | Positive | 3519223 - 3519921 | 27215.5 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis enzyme mnmg | D0T11_15175 | Not Available | Positive | 3520192 - 3522060 | 69087.0 |
| class i sam-dependent methyltransferase | D0T11_15180 | Not Available | Positive | 3522216 - 3523106 | 33505.0 |
| hypothetical protein | D0T11_15185 | Not Available | Positive | 3523147 - 3524928 | 64501.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
