Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter rubripertinctus |
| Strain | strain CCM 8852 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
976622 bp
Thymine Count
975089 bp
Guanine Count
1572314 bp
Cytosine Count
1575162 bp
Genome Length
5099443 bp
Protein-coding Genes
4242 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)h-quinone oxidoreductase | D0T11_14070 | Not Available | Positive | 3253385 - 3254368 | 34430.7 |
| nad-dependent epimerase/dehydratase family protein | D0T11_14075 | Not Available | Positive | 3254489 - 3255133 | 23761.3 |
| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase | D0T11_14080 | Not Available | Positive | 3255417 - 3257561 | 79212.7 |
| hypothetical protein | D0T11_14085 | Not Available | Positive | 3257568 - 3258098 | 20291.7 |
| type ii toxin-antitoxin system hica family toxin | D0T11_14090 | Not Available | Negative | 3258106 - 3258291 | 7079.56 |
| epimerase | D0T11_14100 | Not Available | Positive | 3258710 - 3259375 | 24422.9 |
| hypothetical protein | D0T11_14105 | Not Available | Negative | 3259458 - 3259931 | 16965.4 |
| long-chain fatty acid--coa ligase | D0T11_14110 | Not Available | Positive | 3260119 - 3261891 | 64821.2 |
| hypothetical protein | D0T11_14115 | Not Available | Positive | 3262030 - 3262281 | 10055.6 |
| mmcq/yjbr family dna-binding protein | D0T11_14120 | Not Available | Positive | 3262556 - 3262924 | 13667.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
