Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter rubripertinctus |
| Strain | strain CCM 8852 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
976622 bp
Thymine Count
975089 bp
Guanine Count
1572314 bp
Cytosine Count
1575162 bp
Genome Length
5099443 bp
Protein-coding Genes
4242 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s16 | D0T11_13760 | Not Available | Positive | 3181176 - 3181754 | 20968.7 |
| 16s rrna processing protein rimm | D0T11_13765 | Not Available | Positive | 3181880 - 3182476 | 22331.7 |
| trna (guanosine(37)-n1)-methyltransferase trmd | D0T11_13770 | Not Available | Positive | 3182489 - 3183163 | 24939.0 |
| 50s ribosomal protein l19 | D0T11_13775 | Not Available | Positive | 3183356 - 3183736 | 14427.6 |
| m1 family peptidase | D0T11_13785 | Not Available | Positive | 3184448 - 3187432 | 111489.0 |
| inorganic diphosphatase | D0T11_13790 | Not Available | Positive | 3187595 - 3188197 | 21796.6 |
| dna repair atpase | D0T11_13795 | Not Available | Negative | 3188342 - 3189052 | 26533.0 |
| 6-carboxytetrahydropterin synthase | D0T11_13800 | Not Available | Positive | 3189297 - 3189704 | 15906.8 |
| gtp cyclohydrolase i fole | D0T11_13805 | Not Available | Positive | 3189697 - 3190383 | 25530.5 |
| tigr01777 family protein | D0T11_13810 | Not Available | Positive | 3190515 - 3191429 | 33409.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
