Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter rubripertinctus |
| Strain | strain CCM 8852 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
976622 bp
Thymine Count
975089 bp
Guanine Count
1572314 bp
Cytosine Count
1575162 bp
Genome Length
5099443 bp
Protein-coding Genes
4242 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| m20/m25/m40 family metallo-hydrolase | D0T11_13155 | Not Available | Positive | 3027960 - 3029528 | 57194.4 |
| is1 family transposase | D0T11_13160 | Not Available | Negative | 3030343 - 3030447 | 3908.74 |
| atp-binding protein | D0T11_13165 | Not Available | Positive | 3030446 - 3031132 | 26158.8 |
| hnh endonuclease | D0T11_13170 | Not Available | Positive | 3031136 - 3031783 | 25015.2 |
| type ii toxin-antitoxin system hica family toxin | D0T11_13175 | Not Available | Negative | 3032053 - 3032289 | 9303.36 |
| hypothetical protein | D0T11_13180 | Not Available | Negative | 3032289 - 3032630 | 13111.5 |
| transcription-repair coupling factor | D0T11_13185 | Not Available | Negative | 3032824 - 3036384 | 133318.0 |
| hypothetical protein | D0T11_13190 | Not Available | Positive | 3036577 - 3036795 | 7818.13 |
| hypothetical protein | D0T11_13195 | Not Available | Positive | 3036943 - 3037689 | 26205.4 |
| nyn domain-containing protein | D0T11_13200 | Not Available | Positive | 3038342 - 3039367 | 38855.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
