Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter rubripertinctus |
| Strain | strain CCM 8852 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
976622 bp
Thymine Count
975089 bp
Guanine Count
1572314 bp
Cytosine Count
1575162 bp
Genome Length
5099443 bp
Protein-coding Genes
4242 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rip metalloprotease rsep | D0T11_13105 | Not Available | Positive | 3006820 - 3008166 | 49596.7 |
| hypothetical protein | D0T11_13110 | Not Available | Positive | 3008331 - 3008801 | 17727.6 |
| ompa family protein | D0T11_13115 | Not Available | Negative | 3008859 - 3010940 | 79167.8 |
| endopeptidase la | D0T11_13120 | Not Available | Positive | 3011270 - 3013726 | 90727.9 |
| hypothetical protein | D0T11_13125 | Not Available | Positive | 3013905 - 3014957 | 37777.9 |
| atp-dependent protease atpase subunit hslu | D0T11_13130 | Not Available | Positive | 3015088 - 3016506 | 52420.2 |
| ragb/susd family nutrient uptake outer membrane protein | D0T11_13135 | Not Available | Negative | 3016853 - 3018283 | 51498.9 |
| tonb-dependent receptor | D0T11_13140 | Not Available | Negative | 3018301 - 3021426 | 112692.0 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | D0T11_13145 | Not Available | Negative | 3022661 - 3024049 | 49925.4 |
| susc/raga family tonb-linked outer membrane protein | D0T11_13150 | Not Available | Negative | 3024070 - 3027375 | 118622.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
