Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter rubripertinctus |
| Strain | strain CCM 8852 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
976622 bp
Thymine Count
975089 bp
Guanine Count
1572314 bp
Cytosine Count
1575162 bp
Genome Length
5099443 bp
Protein-coding Genes
4242 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein assembly factor bamd | D0T11_13000 | Not Available | Positive | 2988282 - 2989106 | 31753.3 |
| dna-directed rna polymerase subunit omega | D0T11_13005 | Not Available | Positive | 2989207 - 2989539 | 12534.9 |
| phosphopantothenoylcysteine decarboxylase | D0T11_13010 | Not Available | Positive | 2989684 - 2990235 | 19491.8 |
| phosphopantothenoylcysteine decarboxylase | D0T11_13015 | Not Available | Positive | 2990389 - 2991042 | 23249.7 |
| duf4835 family protein | D0T11_13020 | Not Available | Positive | 2991035 - 2991958 | 34781.4 |
| t9ss c-terminal target domain-containing protein | D0T11_13025 | Not Available | Positive | 2992745 - 2995633 | 99129.1 |
| hypothetical protein | D0T11_13030 | Not Available | Positive | 2995717 - 2995917 | 6686.38 |
| dna repair protein recn | D0T11_13035 | Not Available | Positive | 2996213 - 2997886 | 62583.2 |
| sdr family oxidoreductase | D0T11_13040 | Not Available | Positive | 2998032 - 2998850 | 29646.5 |
| duf3885 domain-containing protein | D0T11_13045 | Not Available | Negative | 2998921 - 2999553 | 24536.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
