Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter rubripertinctus |
| Strain | strain CCM 8852 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
976622 bp
Thymine Count
975089 bp
Guanine Count
1572314 bp
Cytosine Count
1575162 bp
Genome Length
5099443 bp
Protein-coding Genes
4242 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-70 family rna polymerase sigma factor | D0T11_12385 | Not Available | Negative | 2843723 - 2844277 | 20775.7 |
| phzf family phenazine biosynthesis protein | D0T11_12390 | Not Available | Positive | 2844664 - 2845473 | 29356.1 |
| hypothetical protein | D0T11_12395 | Not Available | Positive | 2845470 - 2845853 | 13832.5 |
| hypothetical protein | D0T11_12400 | Not Available | Positive | 2845894 - 2846649 | 28312.1 |
| methyltransferase | D0T11_12405 | Not Available | Positive | 2846646 - 2847407 | 27814.8 |
| hypothetical protein | D0T11_12410 | Not Available | Positive | 2847517 - 2847921 | 15200.2 |
| tetratricopeptide repeat protein | D0T11_12415 | Not Available | Positive | 2848008 - 2849084 | 39722.3 |
| ktsc domain-containing protein | D0T11_12420 | Not Available | Negative | 2849094 - 2849312 | 8046.82 |
| crossover junction endodeoxyribonuclease ruvc | D0T11_12425 | Not Available | Negative | 2849901 - 2850536 | 22737.1 |
| upf0104 family protein | D0T11_12430 | Not Available | Positive | 2850730 - 2851770 | 37449.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
