Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter rubripertinctus |
| Strain | strain CCM 8852 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
976622 bp
Thymine Count
975089 bp
Guanine Count
1572314 bp
Cytosine Count
1575162 bp
Genome Length
5099443 bp
Protein-coding Genes
4242 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s21 | D0T11_00985 | Not Available | Positive | 220372 - 220572 | 7896.82 |
| integrase | D0T11_00990 | Not Available | Positive | 220733 - 221620 | 33605.6 |
| ribosome-associated translation inhibitor raia | D0T11_00995 | Not Available | Positive | 221656 - 221955 | 11460.8 |
| methionine adenosyltransferase | D0T11_01000 | Not Available | Negative | 222044 - 223306 | 45831.2 |
| s9 family peptidase | D0T11_01005 | Not Available | Negative | 223643 - 226096 | 91724.9 |
| hypothetical protein | D0T11_01010 | Not Available | Negative | 226236 - 226853 | 23753.1 |
| n-acetyltransferase | D0T11_01015 | Not Available | Negative | 226911 - 227345 | 16305.5 |
| t9ss c-terminal target domain-containing protein | D0T11_01020 | Not Available | Positive | 227472 - 228839 | 48688.4 |
| cation transporter | D0T11_01025 | Not Available | Negative | 228859 - 229851 | 36128.9 |
| divalent metal cation transporter | D0T11_01030 | Not Available | Positive | 230168 - 231550 | 49746.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
