Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter rubripertinctus |
| Strain | strain CCM 8852 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
976622 bp
Thymine Count
975089 bp
Guanine Count
1572314 bp
Cytosine Count
1575162 bp
Genome Length
5099443 bp
Protein-coding Genes
4242 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-54-dependent fis family transcriptional regulator | D0T11_11275 | Not Available | Positive | 2574003 - 2575385 | 50894.4 |
| hamp domain-containing protein | D0T11_11280 | Not Available | Positive | 2575922 - 2577232 | 48732.4 |
| toxin-antitoxin system ywqk family antitoxin | D0T11_11285 | Not Available | Negative | 2577503 - 2578939 | 53348.6 |
| acetyl-coa c-acyltransferase | D0T11_11290 | Not Available | Negative | 2579157 - 2580332 | 40550.6 |
| glutamate synthase subunit beta | D0T11_11295 | Not Available | Negative | 2580882 - 2582354 | 53658.8 |
| glutamate synthase large subunit | D0T11_11300 | Not Available | Negative | 2582522 - 2587036 | 164510.0 |
| lysr family transcriptional regulator | D0T11_11305 | Not Available | Positive | 2587277 - 2587642 | 13368.3 |
| t9ss c-terminal target domain-containing protein | D0T11_11310 | Not Available | Positive | 2587779 - 2589125 | 47480.1 |
| dna topoisomerase (atp-hydrolyzing) subunit b | D0T11_11315 | Not Available | Positive | 2589285 - 2591273 | 73520.5 |
| polyphosphate kinase 1 | D0T11_11320 | Not Available | Positive | 2591413 - 2593734 | 88934.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
