Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter rubripertinctus |
| Strain | strain CCM 8852 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
976622 bp
Thymine Count
975089 bp
Guanine Count
1572314 bp
Cytosine Count
1575162 bp
Genome Length
5099443 bp
Protein-coding Genes
4242 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gtpase hflx | D0T11_10975 | Not Available | Negative | 2507713 - 2509071 | 50406.8 |
| cytochrome c | D0T11_10980 | Not Available | Negative | 2509206 - 2509577 | 12455.1 |
| hypothetical protein | D0T11_10985 | Not Available | Negative | 2509637 - 2511964 | 83437.3 |
| glycosyltransferase family 1 protein | D0T11_10990 | Not Available | Positive | 2512224 - 2513354 | 41579.4 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | D0T11_10995 | Not Available | Positive | 2513409 - 2513951 | 20101.8 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | D0T11_11000 | Not Available | Negative | 2513972 - 2515273 | 46025.2 |
| t9ss c-terminal target domain-containing protein | D0T11_11005 | Not Available | Positive | 2515319 - 2517619 | 81861.7 |
| amidohydrolase | D0T11_11010 | Not Available | Negative | 2517705 - 2518502 | 30181.0 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | D0T11_11015 | Not Available | Negative | 2518608 - 2519762 | 41746.9 |
| peptide-methionine (s)-s-oxide reductase | D0T11_11020 | Not Available | Negative | 2519928 - 2520614 | 25266.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
