Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter rubripertinctus |
| Strain | strain CCM 8852 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
976622 bp
Thymine Count
975089 bp
Guanine Count
1572314 bp
Cytosine Count
1575162 bp
Genome Length
5099443 bp
Protein-coding Genes
4242 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | D0T11_00835 | Not Available | Negative | 180409 - 183468 | 110657.0 |
| duf4861 domain-containing protein | D0T11_00840 | Not Available | Positive | 183840 - 185045 | 44303.4 |
| 5-dehydro-4-deoxy-d-glucuronate isomerase | D0T11_00845 | Not Available | Positive | 185102 - 185920 | 30190.0 |
| t9ss c-terminal target domain-containing protein | D0T11_00850 | Not Available | Negative | 186129 - 188219 | 72689.7 |
| mannonate dehydratase | D0T11_00855 | Not Available | Positive | 188611 - 189774 | 42970.3 |
| chloramphenicol acetyltransferase | D0T11_00860 | Not Available | Negative | 189938 - 190570 | 23534.0 |
| had family hydrolase | D0T11_00865 | Not Available | Positive | 190619 - 191332 | 26422.8 |
| hypothetical protein | D0T11_00870 | Not Available | Negative | 191334 - 191891 | 20950.4 |
| excinuclease abc subunit uvrb | D0T11_00875 | Not Available | Negative | 192014 - 194050 | 77138.0 |
| hypothetical protein | D0T11_00880 | Not Available | Negative | 194241 - 194573 | 11730.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
