Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter rubripertinctus |
| Strain | strain CCM 8852 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
976622 bp
Thymine Count
975089 bp
Guanine Count
1572314 bp
Cytosine Count
1575162 bp
Genome Length
5099443 bp
Protein-coding Genes
4242 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna (uracil(1939)-c(5))-methyltransferase rlmd | D0T11_09810 | Not Available | Positive | 2223895 - 2225244 | 51265.2 |
| giy-yig nuclease family protein | D0T11_09815 | Not Available | Positive | 2225302 - 2225583 | 10792.8 |
| hypothetical protein | D0T11_09820 | Not Available | Positive | 2225697 - 2226071 | 14291.6 |
| thiamine-phosphate kinase | D0T11_09825 | Not Available | Negative | 2226227 - 2227246 | 36243.6 |
| t9ss c-terminal target domain-containing protein | D0T11_09830 | Not Available | Negative | 2227484 - 2228557 | 37665.1 |
| tetr/acrr family transcriptional regulator | D0T11_09835 | Not Available | Positive | 2228782 - 2229372 | 21777.9 |
| 1,2-phenylacetyl-coa epoxidase subunit a | D0T11_09840 | Not Available | Positive | 2229534 - 2230496 | 36529.8 |
| phenylacetic acid degradation b | D0T11_09845 | Not Available | Positive | 2230653 - 2231276 | 23216.2 |
| phenylacetate-coa oxygenase subunit paai | D0T11_09850 | Not Available | Positive | 2231417 - 2232166 | 28076.4 |
| phenylacetate-coa oxygenase subunit paaj | D0T11_09855 | Not Available | Positive | 2232485 - 2232970 | 18208.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
