Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter rubripertinctus |
| Strain | strain CCM 8852 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
976622 bp
Thymine Count
975089 bp
Guanine Count
1572314 bp
Cytosine Count
1575162 bp
Genome Length
5099443 bp
Protein-coding Genes
4242 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| t9ss c-terminal target domain-containing protein | D0T11_09410 | Not Available | Negative | 2133110 - 2137987 | 164615.0 |
| t9ss c-terminal target domain-containing protein | D0T11_09415 | Not Available | Negative | 2138248 - 2141373 | 107958.0 |
| Trna-met | Not Available | Not Available | Positive | 2142227 - 2142303 | Not Available |
| had family phosphatase | D0T11_09425 | Not Available | Positive | 2142579 - 2143217 | 23838.6 |
| site-2 protease family protein | D0T11_09430 | Not Available | Positive | 2143387 - 2144499 | 40604.4 |
| hypothetical protein | D0T11_09435 | Not Available | Positive | 2144647 - 2145297 | 24604.1 |
| phosphoglycerate kinase | D0T11_09440 | Not Available | Negative | 2145387 - 2146580 | 42359.6 |
| d-alanine--d-alanine ligase | D0T11_09445 | Not Available | Positive | 2146809 - 2149619 | 103409.0 |
| pasta domain-containing protein | D0T11_09450 | Not Available | Positive | 2149728 - 2150513 | 28678.8 |
| t9ss c-terminal target domain-containing protein | D0T11_09455 | Not Available | Positive | 2150644 - 2152506 | 66835.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
