Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter rubripertinctus |
| Strain | strain CCM 8852 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
976622 bp
Thymine Count
975089 bp
Guanine Count
1572314 bp
Cytosine Count
1575162 bp
Genome Length
5099443 bp
Protein-coding Genes
4242 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase | D0T11_09105 | Not Available | Negative | 2051615 - 2053474 | 68651.1 |
| isochorismate synthase | D0T11_09110 | Not Available | Negative | 2053583 - 2054797 | 44027.8 |
| hotdog fold thioesterase | D0T11_09115 | Not Available | Negative | 2055024 - 2055443 | 15072.4 |
| histidine phosphatase family protein | D0T11_09120 | Not Available | Positive | 2055632 - 2056267 | 23988.7 |
| pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase | D0T11_09125 | Not Available | Positive | 2056520 - 2058283 | 60170.0 |
| tonb-dependent receptor | D0T11_09130 | Not Available | Positive | 2058554 - 2061127 | 92353.0 |
| atp-dependent protease subunit hslv | D0T11_09135 | Not Available | Positive | 2061301 - 2061837 | 19510.7 |
| deoxyhypusine synthase | D0T11_09140 | Not Available | Positive | 2061962 - 2062933 | 36255.2 |
| hypothetical protein | D0T11_09145 | Not Available | Negative | 2063016 - 2063855 | 31440.4 |
| hypothetical protein | D0T11_09150 | Not Available | Negative | 2063944 - 2064351 | 14717.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
