Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter rubripertinctus |
| Strain | strain CCM 8852 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
976622 bp
Thymine Count
975089 bp
Guanine Count
1572314 bp
Cytosine Count
1575162 bp
Genome Length
5099443 bp
Protein-coding Genes
4242 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| t9ss c-terminal target domain-containing protein | D0T11_06765 | Not Available | Negative | 1510798 - 1513140 | 80025.4 |
| dsba family protein | D0T11_06770 | Not Available | Positive | 1513352 - 1514011 | 23686.1 |
| hypothetical protein | D0T11_06775 | Not Available | Negative | 1514024 - 1514602 | 21077.0 |
| isas1 family transposase | D0T11_06780 | Not Available | Negative | 1514608 - 1514737 | 4881.06 |
| is5/is1182 family transposase | D0T11_06785 | Not Available | Positive | 1514738 - 1514857 | 4840.99 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | D0T11_06790 | Not Available | Positive | 1514990 - 1515718 | 26200.4 |
| 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-coa isomerase | D0T11_06795 | Not Available | Positive | 1515847 - 1516644 | 28481.1 |
| hypothetical protein | D0T11_06800 | Not Available | Negative | 1516713 - 1517570 | 30042.1 |
| duf4142 domain-containing protein | D0T11_06805 | Not Available | Positive | 1517763 - 1518341 | 21250.2 |
| hypothetical protein | D0T11_06810 | Not Available | Positive | 1518383 - 1518616 | 7574.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
