Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter rubripertinctus |
| Strain | strain CCM 8852 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
976622 bp
Thymine Count
975089 bp
Guanine Count
1572314 bp
Cytosine Count
1575162 bp
Genome Length
5099443 bp
Protein-coding Genes
4242 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xre family transcriptional regulator | D0T11_06150 | Not Available | Negative | 1366256 - 1367740 | 56722.2 |
| malate synthase a | D0T11_06155 | Not Available | Positive | 1368023 - 1369648 | 61398.7 |
| isocitrate lyase | D0T11_06160 | Not Available | Positive | 1369834 - 1371123 | 46928.6 |
| is1 family transposase | D0T11_06165 | Not Available | Negative | 1371355 - 1371462 | 4036.88 |
| duf2723 domain-containing protein | D0T11_06170 | Not Available | Negative | 1371586 - 1374582 | 112371.0 |
| t9ss c-terminal target domain-containing protein | D0T11_06175 | Not Available | Negative | 1374833 - 1375456 | 22116.7 |
| biotin--[acetyl-coa-carboxylase] ligase | D0T11_06180 | Not Available | Negative | 1375674 - 1376462 | 28732.7 |
| ribosome silencing factor | D0T11_06185 | Not Available | Positive | 1376478 - 1376873 | 15028.8 |
| atp-dependent metallopeptidase ftsh/yme1/tma family protein | D0T11_06190 | Not Available | Positive | 1376973 - 1379096 | 76907.8 |
| hypothetical protein | D0T11_06195 | Not Available | Positive | 1379679 - 1380341 | 24289.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
