Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter rubripertinctus |
| Strain | strain CCM 8852 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
976622 bp
Thymine Count
975089 bp
Guanine Count
1572314 bp
Cytosine Count
1575162 bp
Genome Length
5099443 bp
Protein-coding Genes
4242 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional (p)ppgpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | D0T11_05595 | Not Available | Negative | 1230038 - 1232245 | 84351.3 |
| Trna-leu | Not Available | Not Available | Positive | 1232537 - 1232618 | Not Available |
| trigger factor | D0T11_05605 | Not Available | Positive | 1232746 - 1234074 | 50085.9 |
| atp-dependent clp protease proteolytic subunit | D0T11_05610 | Not Available | Positive | 1234259 - 1234969 | 26190.5 |
| atp-dependent clp protease atp-binding subunit clpx | D0T11_05615 | Not Available | Positive | 1235191 - 1236414 | 45529.2 |
| hypothetical protein | D0T11_05620 | Not Available | Negative | 1236528 - 1237655 | 42472.4 |
| atp-binding cassette domain-containing protein | D0T11_05625 | Not Available | Negative | 1237652 - 1238287 | 23542.3 |
| lipid-a-disaccharide synthase | D0T11_05630 | Not Available | Negative | 1238527 - 1239636 | 41975.6 |
| 6-carboxytetrahydropterin synthase | D0T11_05635 | Not Available | Negative | 1239806 - 1240222 | 16082.1 |
| iron abc transporter permease | D0T11_05640 | Not Available | Negative | 1240324 - 1241325 | 34835.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
