Veillonella atypica strain KHUD_V1

Gram-negativeCoccusAnaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Negativicutes

Order

Veillonellales

Family

Veillonellaceae

Genus

Veillonella

Description

Veillonella atypica strain KHUD_V1 is a Gram-negative, anaerobic bacterium primarily found in the oral cavity of humans (Homo sapiens). This strain exhibits the presence of flagella, which may contribute to its motility within the complex environment of the oral microbiome. With a single replicon, Veillonella atypica KHUD_V1 showcases a streamlined genetic organization, which is characteristic of many bacteria adapted to specific niches. The reliance on anaerobic conditions suggests that this organism thrives in environments devoid of oxygen, highlighting its role in the oral cavity's microbiological ecosystem, where anaerobic conditions often prevail due to the presence of various host-derived substrates. The accession number for this strain is QXZZ00000000.1, which aids in the identification and further study of its genomic properties. The ecological insight derived from the presence of Veillonella atypica in the oral cavity underscores its potential role in human health, particularly in dental and periodontal contexts, where the balance of microbial communities is crucial for maintaining oral health. The interactions of Veillonella atypica with other microorganisms in the oral cavity could influence the overall microbiome composition and the host's susceptibility to oral diseases.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassNegativicutes
OrderVeillonellales
FamilyVeillonellaceae
GenusVeillonella
SpeciesVeillonella atypica
Strainstrain KHUD_V1

Profile

Physiology
Gram staining propertiesNegative
ShapeCoccus
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatoral cavity
Biotic relationshipNot Available
Host(s)Homo sapiens, Mammalia
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Veillonella atypica strain KHUD_V1

Gene Summary

Adenine Count

663155 bp

Thymine Count

672157 bp

Guanine Count

429253 bp

Cytosine Count

424187 bp

Genome Length

2189293 bp

Protein-coding Genes

1902 genes

Non-Coding Genes

121 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trigger factorD2965_01025Not AvailablePositive223300 - 22460448090.8
atp-dependent clp endopeptidase proteolytic subunit clppD2965_01030Not AvailablePositive224639 - 22523221578.9
atp-dependent protease atp-binding subunit clpxD2965_01035Not AvailablePositive225245 - 22649846120.7
endopeptidase laD2965_01040Not AvailablePositive226564 - 22887385921.5
yiha family ribosome biogenesis gtp-binding proteinD2965_01045Not AvailablePositive228873 - 22957126368.9
polyprenyl synthetase family proteinD2965_01050Not AvailablePositive229568 - 23053936322.5
twin-arginine translocase subunit tatcD2965_01055Not AvailablePositive230541 - 23142533776.5
valine--trna ligaseD2965_01060Not AvailablePositive231448 - 234105102029.0
bifunctional folylpolyglutamate synthase/dihydrofolate synthaseD2965_01065Not AvailablePositive234115 - 23542247144.5
polymeraseD2965_01070Not AvailablePositive235432 - 23670048406.0

Displaying genes 301 – 310 of 1376 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Pulmonary infectionCausesPMC7324755

Displaying health effects 1 – 1 of 1 in total