Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | strain VcCHNf8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Mollusca, Mammalia |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1060822 bp
Thymine Count
1059474 bp
Guanine Count
953069 bp
Cytosine Count
966650 bp
Genome Length
4040292 bp
Protein-coding Genes
3641 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hlyd family type i secretion periplasmic adaptor subunit | D2929_00175 | Not Available | Negative | 35570 - 36973 | 52966.6 |
| peptidase domain-containing abc transporter | D2929_00180 | Not Available | Negative | 36928 - 39090 | 81368.3 |
| peptide chain release factor 1 | D2929_00185 | Not Available | Positive | 39447 - 39806 | 13146.9 |
| toxin-activating lysine-acyltransferase rtxc | D2929_00190 | Not Available | Positive | 39832 - 40293 | 17895.6 |
| martx multifunctional-autoprocessing repeats-in-toxin holotoxin rtxa | D2929_00195 | Not Available | Positive | 40317 - 53894 | 483709.0 |
| Ncrna_class:srp_rna | Not Available | Not Available | Positive | 51585 - 51681 | Not Available |
| hypothetical protein | D2929_00275 | Not Available | Negative | 64607 - 64927 | 11198.2 |
| hypothetical protein | D2929_00280 | Not Available | Negative | 64930 - 66354 | 51980.4 |
| hypothetical protein | D2929_00285 | Not Available | Negative | 66420 - 66674 | 8243.93 |
| hypothetical protein | D2929_00290 | Not Available | Negative | 67006 - 67311 | 11107.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Cholera | Causes | PMC10103850 |
| Ear infections | Causes | PMC10103850 |
| Wound infections | Causes | PMC10103850 |
| Septicaemia | Causes | PMC10103850 |
| Gastrointestinal infections | Causes | PMC10103850 |
| Necrotizing fasciitis | Causes | PMC10103850 |
| Vibriosis | Causes | PMC10472736 |
| Pneumonia | Causes | PMC12801787 |
| Gastroenteritis | Causes | PMC12801787 |
| Sinusitis | Causes | PMC12801787 |






