Vibrio cholerae strain VcCHNf8

Gram-negativeRodNon-motileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio cholerae strain VcCHNf8 is a Gram-negative, rod-shaped bacterium that typically exists as single cells. This strain demonstrates a facultative anaerobic metabolism, allowing it to thrive in both aerobic and anaerobic environments. As a heterotroph, VcCHNf8 relies on organic compounds for energy, which may contribute to its adaptability in diverse habitats. Optimal growth conditions for V. cholerae strain VcCHNf8 occur at a temperature of 20.0°C, suggesting a preference for cooler environments often associated with aquatic ecosystems. The ability to inhabit multiple habitats indicates a versatile ecological niche, potentially including brackish and freshwater environments, which are characteristic of many Vibrio species. The facultative anaerobic nature of this strain may enhance its survival in fluctuating oxygen levels, a common feature of environments such as estuaries where oxygen concentration can vary significantly. Understanding the ecological role of V. cholerae strain VcCHNf8, particularly in nutrient-rich waters where organic matter is abundant, could provide insights into its interactions within microbial communities and its potential influence on nutrient cycling. This adaptability highlights the importance of environmental conditions in shaping the ecology of Vibrio species.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio cholerae
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Vibrio cholerae strain VcCHNf8
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature20
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Vibrio cholerae strain VcCHNf8

Accession NumberQXWH00000000.1

Gene Summary

Adenine Count

1060822 bp

Thymine Count

1059474 bp

Guanine Count

953069 bp

Cytosine Count

966650 bp

Genome Length

4040292 bp

Protein-coding Genes

3641 genes

Non-Coding Genes

108 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
hypothetical proteinD2929_00025Not Available+6039 - 670425574.7
hypothetical proteinD2929_00030Not Available+6704 - 744428614.4
duf2931 family proteinD2929_00035Not Available+7589 - 832627916.1
lyse family translocatorD2929_00040Not Available+8414 - 905222780.4
sodium:alanine symporter family proteinD2929_00045Not Available-9125 - 1050148229.7
hypothetical proteinD2929_00050Not Available+11004 - 111625923.77
chromosome partitioning protein paraD2929_00055Not Available+11179 - 1191328322.3
extracellular solute-binding proteinD2929_00060Not Available-12062 - 1309938998.5
extracellular solute-binding proteinD2929_00065Not Available-13211 - 1424238151.3
spermidine/putrescine abc transporter permease potcD2929_00070Not Available-14345 - 1511528114.6

Displaying genes 41 – 50 of 3749 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites