Vibrio cholerae strain VcCHNf8

Gram-negativeRodNon-motileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio cholerae strain VcCHNf8 is a Gram-negative, rod-shaped bacterium characterized by its facultative anaerobic metabolism and heterotrophic energy source. This strain typically exists as single cells and possesses flagella, indicating motility. It is mesophilic, with an optimal growth temperature of 20°C, and demonstrates a robust capacity for adaptation across a range of habitats. VcCHNf8 is free-living and interacts with various hosts, including Homo sapiens, Mollusca, Mammalia, and Penaeus vannamei. Its pathogenic potential is significant, as it is associated with a variety of illnesses in humans, notably cholera and other gastrointestinal infections. The strain can cause severe health effects including pneumonia, peritonitis, and sepsis, among others, highlighting its role in a broad spectrum of infectious diseases. The presence of a single replicon and a dual membrane system further support its classification within the Vibrio genus. These traits contribute to its ecological versatility and pathogenicity. The strain's ability to thrive in diverse environments suggests a complex relationship with both aquatic and terrestrial ecosystems. Overall, Vibrio cholerae strain VcCHNf8 underscores the importance of monitoring aquatic environments, given its potential to cause outbreaks of cholera and other serious infections in human populations. This awareness is critical for public health efforts aimed at preventing the spread of waterborne diseases associated with this pathogen.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio cholerae
Strainstrain VcCHNf8

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Vibrio cholerae strain VcCHNf8
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature20
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Homo sapiens, Mollusca, Mammalia
Cell arrangementSingles
SporulationNonsporulating
Energy sourceHeterotroph
PathogenicityHuman

Genome Summary

Vibrio cholerae strain VcCHNf8 Scaffold103, whole genome shotgun

Gene Summary

Adenine Count

1060822 bp

Thymine Count

1059474 bp

Guanine Count

953069 bp

Cytosine Count

966650 bp

Genome Length

4040292 bp

Protein-coding Genes

3641 genes

Non-Coding Genes

108 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
50s ribosomal protein l31 type bD2929_12810Not AvailableNegative2820318 - 28205759929.68
trna (n6-threonylcarbamoyladenosine(37)-n6)-methyltransferase trmoD2929_12815Not AvailablePositive2820709 - 282140425864.0
proline--trna ligaseD2929_12820Not AvailablePositive2821630 - 282334563170.1
duf533 domain-containing proteinD2929_12825Not AvailablePositive2823587 - 282423122873.4
yaep family proteinD2929_12830Not AvailablePositive2824334 - 28245377179.54
duf4250 domain-containing proteinD2929_12835Not AvailablePositive2824543 - 28247347145.7
phosphoribosylformylglycinamidine synthaseD2929_12840Not AvailableNegative2824835 - 2828728141414.0
hypothetical proteinD2929_12845Not AvailableNegative2828725 - 28289378003.68
lytic transglycosylase fD2929_12850Not AvailablePositive2829038 - 283063060756.6
trna adenosine(34) deaminase tadaD2929_12855Not AvailableNegative2830986 - 283156721278.6

Displaying genes 2541 – 2550 of 3749 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
CholeraCausesPMC10103850
Ear infectionsCausesPMC10103850
Wound infectionsCausesPMC10103850
SepticaemiaCausesPMC10103850
Gastrointestinal infectionsCausesPMC10103850
Necrotizing fasciitisCausesPMC10103850
VibriosisCausesPMC10472736
PneumoniaCausesPMC12801787
GastroenteritisCausesPMC12801787
SinusitisCausesPMC12801787

Displaying health effects 1 – 10 of 38 in total