Vibrio cholerae strain VcCHNf7

Gram-negativeRodNon-motileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio cholerae strain VcCHNf7 is a Gram-negative, rod-shaped bacterium characterized as a facultative anaerobe. This strain is classified as a heterotroph, relying on organic compounds for energy. VcCHNf7 is notable for its ability to thrive in multiple habitats, emphasizing its ecological versatility. It possesses flagella, yet it is non-motile, which may influence its interaction with various environments and hosts. The optimal temperature for VcCHNf7 growth is 20°C, placing it within a mesophilic temperature range. This bacterium is free-living and has a single replicon along with a double membrane structure, typical for Gram-negative bacteria. It has a diverse range of potential hosts, including Homo sapiens, various mollusks, mammals, and the shrimp species Penaeus vannamei. Health effects associated with VcCHNf7 are significant and include a variety of infections, such as cholera, pneumonia, gastrointestinal infections, and septic conditions. These pathogenic traits underscore its potential public health implications, particularly its role in clinical cholera and diarrheal infections, which can lead to severe morbidity and mortality. In summary, Vibrio cholerae strain VcCHNf7’s ecological adaptability, diverse host range, and pathogenic potential highlight its importance in both environmental microbiology and public health contexts. Understanding its biology and ecology is crucial for developing effective strategies to manage cholera outbreaks and related diseases.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio cholerae
Strainstrain VcCHNf7

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Vibrio cholerae strain VcCHNf7
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature20
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Homo sapiens, Mollusca, Mammalia
Cell arrangementSingles
SporulationNonsporulating
Energy sourceHeterotroph
PathogenicityHuman

Genome Summary

Vibrio cholerae strain VcCHNf7 Scaffold103, whole genome shotgun

Gene Summary

Adenine Count

1049392 bp

Thymine Count

1053357 bp

Guanine Count

961063 bp

Cytosine Count

943627 bp

Genome Length

4007494 bp

Protein-coding Genes

3624 genes

Non-Coding Genes

116 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinD2928_16875Not AvailablePositive3661609 - 366411395414.4
type iii-b crispr module ramp protein cmr1D2928_16980Not AvailablePositive3681253 - 368245544692.4
type iii-b crispr-associated protein cas10/cmr2D2928_16985Not AvailablePositive3682455 - 368429668116.4
crispr-associated protein cmr3D2928_16990Not AvailablePositive3684299 - 368545942792.0
type iii-b crispr module ramp protein cmr4D2928_16995Not AvailablePositive3685483 - 368636132337.4
type iii-b crispr module-associated protein cmr5D2928_17000Not AvailablePositive3686365 - 368679315861.2
type iii-b crispr module ramp protein cmr6D2928_17005Not AvailablePositive3686790 - 368784539354.6
type i-f crispr-associated endoribonuclease cas6/csy4D2928_17015Not AvailablePositive3688642 - 368919320753.2
plxrfg domain-containing proteinD2928_17020Not AvailablePositive3691449 - 3704159469729.0
chemotaxis proteinD2928_17025Not AvailablePositive3704425 - 370551039887.3

Displaying genes 3351 – 3360 of 3740 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
CholeraCausesPMC10103850
Ear infectionsCausesPMC10103850
Wound infectionsCausesPMC10103850
SepticaemiaCausesPMC10103850
Gastrointestinal infectionsCausesPMC10103850
Necrotizing fasciitisCausesPMC10103850
VibriosisCausesPMC10472736
PneumoniaCausesPMC12801787
GastroenteritisCausesPMC12801787
SinusitisCausesPMC12801787

Displaying health effects 1 – 10 of 38 in total