Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | strain VcCHNf7 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Mollusca, Mammalia |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1049392 bp
Thymine Count
1053357 bp
Guanine Count
961063 bp
Cytosine Count
943627 bp
Genome Length
4007494 bp
Protein-coding Genes
3624 genes
Non-Coding Genes
116 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system membrane subunit tssm | D2928_15285 | Not Available | Positive | 3322129 - 3325674 | 134785.0 |
| type vi secretion protein | D2928_15290 | Not Available | Positive | 3325722 - 3326987 | 48233.6 |
| type vi secretion system tip protein vgrg | D2928_15300 | Not Available | Positive | 3327240 - 3329002 | 66294.8 |
| gamma carbonic anhydrase family protein | D2928_15310 | Not Available | Positive | 3329366 - 3329920 | 19870.0 |
| duf1488 domain-containing protein | D2928_15315 | Not Available | Negative | 3329901 - 3330176 | 10516.4 |
| shikimate dehydrogenase | D2928_15320 | Not Available | Negative | 3330173 - 3331009 | 30237.3 |
| oxygen-dependent coproporphyrinogen oxidase | D2928_15325 | Not Available | Negative | 3331071 - 3331988 | 35255.7 |
| threonylcarbamoyl-amp synthase | D2928_15330 | Not Available | Negative | 3332007 - 3332573 | 20276.6 |
| 5-(carboxyamino)imidazole ribonucleotide mutase | D2928_15335 | Not Available | Positive | 3332731 - 3333216 | 16674.2 |
| 5-(carboxyamino)imidazole ribonucleotide synthase | D2928_15340 | Not Available | Positive | 3333220 - 3334353 | 41049.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Cholera | Causes | PMC10103850 |
| Ear infections | Causes | PMC10103850 |
| Wound infections | Causes | PMC10103850 |
| Septicaemia | Causes | PMC10103850 |
| Gastrointestinal infections | Causes | PMC10103850 |
| Necrotizing fasciitis | Causes | PMC10103850 |
| Vibriosis | Causes | PMC10472736 |
| Pneumonia | Causes | PMC12801787 |
| Gastroenteritis | Causes | PMC12801787 |
| Sinusitis | Causes | PMC12801787 |






