Vibrio cholerae strain VcCHNf7

Gram-negativeRodNon-motileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio cholerae strain VcCHNf7 is a Gram-negative, rod-shaped bacterium characterized as a facultative anaerobe. This strain is classified as a heterotroph, relying on organic compounds for energy. VcCHNf7 is notable for its ability to thrive in multiple habitats, emphasizing its ecological versatility. It possesses flagella, yet it is non-motile, which may influence its interaction with various environments and hosts. The optimal temperature for VcCHNf7 growth is 20°C, placing it within a mesophilic temperature range. This bacterium is free-living and has a single replicon along with a double membrane structure, typical for Gram-negative bacteria. It has a diverse range of potential hosts, including Homo sapiens, various mollusks, mammals, and the shrimp species Penaeus vannamei. Health effects associated with VcCHNf7 are significant and include a variety of infections, such as cholera, pneumonia, gastrointestinal infections, and septic conditions. These pathogenic traits underscore its potential public health implications, particularly its role in clinical cholera and diarrheal infections, which can lead to severe morbidity and mortality. In summary, Vibrio cholerae strain VcCHNf7’s ecological adaptability, diverse host range, and pathogenic potential highlight its importance in both environmental microbiology and public health contexts. Understanding its biology and ecology is crucial for developing effective strategies to manage cholera outbreaks and related diseases.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio cholerae
Strainstrain VcCHNf7

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Vibrio cholerae strain VcCHNf7
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature20
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Homo sapiens, Mollusca, Mammalia
Cell arrangementSingles
SporulationNonsporulating
Energy sourceHeterotroph
PathogenicityHuman

Genome Summary

Vibrio cholerae strain VcCHNf7 Scaffold103, whole genome shotgun

Gene Summary

Adenine Count

1049392 bp

Thymine Count

1053357 bp

Guanine Count

961063 bp

Cytosine Count

943627 bp

Genome Length

4007494 bp

Protein-coding Genes

3624 genes

Non-Coding Genes

116 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
arginine abc transporter permease artmD2928_07630Not AvailableNegative1692246 - 169291424722.8
arginine abc transporter permease artqD2928_07635Not AvailableNegative1692911 - 169360024566.8
arginine abc transporter substrate-binding proteinD2928_07640Not AvailableNegative1693602 - 169433326651.4
arginine abc transporter atp-binding protein artpD2928_07645Not AvailableNegative1694407 - 169513526715.3
Trna-cysNot AvailableNot AvailablePositive1695431 - 1695504Not Available
atpase rava stimulator viaaD2928_07655Not AvailableNegative1695728 - 169717355704.1
duf3763 domain-containing proteinD2928_07660Not AvailableNegative1697182 - 169884063121.7
nudix hydrolaseD2928_07665Not AvailablePositive1699150 - 169970720622.8
low-specificity l-threonine aldolaseD2928_07670Not AvailablePositive1699692 - 170072337304.6
cytochrome cD2928_07675Not AvailablePositive1700853 - 170116111128.4

Displaying genes 1531 – 1540 of 3740 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
CholeraCausesPMC10103850
Ear infectionsCausesPMC10103850
Wound infectionsCausesPMC10103850
SepticaemiaCausesPMC10103850
Gastrointestinal infectionsCausesPMC10103850
Necrotizing fasciitisCausesPMC10103850
VibriosisCausesPMC10472736
PneumoniaCausesPMC12801787
GastroenteritisCausesPMC12801787
SinusitisCausesPMC12801787

Displaying health effects 1 – 10 of 38 in total