Vibrio cholerae strain VcCHNf7

Gram-negativeRodNon-motileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio cholerae strain VcCHNf7 is a Gram-negative, rod-shaped bacterium characterized as a facultative anaerobe. This strain is classified as a heterotroph, relying on organic compounds for energy. VcCHNf7 is notable for its ability to thrive in multiple habitats, emphasizing its ecological versatility. It possesses flagella, yet it is non-motile, which may influence its interaction with various environments and hosts. The optimal temperature for VcCHNf7 growth is 20°C, placing it within a mesophilic temperature range. This bacterium is free-living and has a single replicon along with a double membrane structure, typical for Gram-negative bacteria. It has a diverse range of potential hosts, including Homo sapiens, various mollusks, mammals, and the shrimp species Penaeus vannamei. Health effects associated with VcCHNf7 are significant and include a variety of infections, such as cholera, pneumonia, gastrointestinal infections, and septic conditions. These pathogenic traits underscore its potential public health implications, particularly its role in clinical cholera and diarrheal infections, which can lead to severe morbidity and mortality. In summary, Vibrio cholerae strain VcCHNf7’s ecological adaptability, diverse host range, and pathogenic potential highlight its importance in both environmental microbiology and public health contexts. Understanding its biology and ecology is crucial for developing effective strategies to manage cholera outbreaks and related diseases.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio cholerae
Strainstrain VcCHNf7

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Vibrio cholerae strain VcCHNf7
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature20
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Homo sapiens, Mollusca, Mammalia
Cell arrangementSingles
SporulationNonsporulating
Energy sourceHeterotroph
PathogenicityHuman

Genome Summary

Vibrio cholerae strain VcCHNf7 Scaffold103, whole genome shotgun

Gene Summary

Adenine Count

1049392 bp

Thymine Count

1053357 bp

Guanine Count

961063 bp

Cytosine Count

943627 bp

Genome Length

4007494 bp

Protein-coding Genes

3624 genes

Non-Coding Genes

116 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
arginyltransferaseD2928_06915Not AvailablePositive1528877 - 152957827351.8
translation initiation factor if-1D2928_06920Not AvailablePositive1529662 - 15298808223.14
trans-2-enoyl-coa reductase family proteinD2928_06925Not AvailableNegative1530022 - 153122744133.6
acyl-coa dehydrogenaseD2928_06930Not AvailableNegative1531552 - 153383483309.4
tetr/acrr family transcriptional regulatorD2928_06935Not AvailableNegative1533890 - 153456425466.6
1-aminocyclopropane-1-carboxylate deaminase/d-cysteine desulfhydraseD2928_06940Not AvailablePositive1535048 - 153595934807.7
duf1496 domain-containing proteinD2928_06945Not AvailablePositive1536004 - 153628510151.3
succinate-semialdehyde dehydrogenaseD2928_06950Not AvailableNegative1536266 - 153773252409.1
tetr/acrr family transcriptional regulatorD2928_06955Not AvailableNegative1537750 - 153837923745.0
hypothetical proteinD2928_06960Not AvailablePositive1538305 - 15385178047.75

Displaying genes 1391 – 1400 of 3740 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
CholeraCausesPMC10103850
Ear infectionsCausesPMC10103850
Wound infectionsCausesPMC10103850
SepticaemiaCausesPMC10103850
Gastrointestinal infectionsCausesPMC10103850
Necrotizing fasciitisCausesPMC10103850
VibriosisCausesPMC10472736
PneumoniaCausesPMC12801787
GastroenteritisCausesPMC12801787
SinusitisCausesPMC12801787

Displaying health effects 1 – 10 of 38 in total