Vibrio cholerae strain VcCHNf6

Gram-negativeRodNon-motileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio cholerae strain VcCHNf6 is a Gram-negative, rod-shaped bacterium that exhibits several notable traits. It is a facultative anaerobe, indicating its ability to thrive in both aerobic and anaerobic environments, and it is classified as a heterotroph, relying on organic compounds for energy. This strain is characterized by its free-living nature and can be found in various habitats, including aquatic environments where it may interact with different hosts. The strain possesses a single replicon and is surrounded by two membranes, a characteristic feature of Gram-negative bacteria. While VcCHNf6 does not exhibit mobility, it does have flagella, which can play a role in its environmental interactions. In terms of temperature preferences, VcCHNf6 is mesophilic, with an optimal growth temperature of around 20°C. This temperature range suggests that it is well-adapted to moderate environmental conditions. The bacterium has a broad host range, affecting Homo sapiens, Mollusca, Mammalia, and the shrimp species Penaeus vannamei. Health effects associated with VcCHNf6 are significant, as they include severe conditions such as cholera, pneumonia, gastrointestinal infections, and sepsis, among others. This pathogenicity highlights the strain's potential impact on human health, particularly in relation to cholera disease and associated diarrheal infections. The ecological insight from these traits suggests that the strain's ability to thrive in diverse environments and its interactions with various hosts could contribute to its persistence and potential for outbreaks in human populations.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio cholerae
Strainstrain VcCHNf6

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Vibrio cholerae strain VcCHNf6
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature20
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Homo sapiens, Mollusca, Mammalia
Cell arrangementSingles
SporulationNonsporulating
Energy sourceHeterotroph
PathogenicityHuman

Genome Summary

Vibrio cholerae strain VcCHNf6 Scaffold95, whole genome shotgun

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
4-phosphoerythronate dehydrogenaseD2927_03195Not AvailableNegative721766 - 72292942589.5
beta-ketoacyl-acp synthase iD2927_03200Not AvailableNegative723115 - 72432642572.7
bifunctional trna (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase mnmd/fad-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase mnmcD2927_03205Not AvailablePositive724444 - 72646874795.1
nad(p)h-dependent oxidoreductaseD2927_03210Not AvailableNegative726547 - 72707418411.7
yfcl family proteinD2927_03215Not AvailableNegative727299 - 7275629557.26
elongation factor p hydroxylaseD2927_03220Not AvailableNegative727601 - 72813120425.2
trimeric intracellular cation channel family proteinD2927_03225Not AvailablePositive728500 - 72912322502.4
chorismate synthaseD2927_03230Not AvailableNegative729205 - 73029039091.4
hypothetical proteinD2927_03235Not AvailablePositive730388 - 7306129144.64
50s ribosomal protein l3 n(5)-glutamine methyltransferaseD2927_03240Not AvailableNegative730520 - 73145235153.9

Displaying genes 661 – 670 of 3746 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
CholeraCausesPMC10103850
Ear infectionsCausesPMC10103850
Wound infectionsCausesPMC10103850
SepticaemiaCausesPMC10103850
Gastrointestinal infectionsCausesPMC10103850
Necrotizing fasciitisCausesPMC10103850
VibriosisCausesPMC10472736
PneumoniaCausesPMC12801787
GastroenteritisCausesPMC12801787
SinusitisCausesPMC12801787

Displaying health effects 1 – 10 of 38 in total