Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | strain VcCHNf6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Mollusca, Mammalia |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Human |
Genome Summary
Vibrio cholerae strain VcCHNf6 Scaffold95, whole genome shotgun
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i-f crispr-associated endoribonuclease cas6/csy4 | D2927_01675 | Not Available | Negative | 393720 - 394271 | 20778.1 |
| hypothetical protein | D2927_01680 | Not Available | Negative | 394280 - 395335 | 39738.8 |
| hypothetical protein | D2927_01685 | Not Available | Negative | 395345 - 396292 | 35537.1 |
| crispr-associated endonuclease cas3'' | D2927_01690 | Not Available | Negative | 396296 - 399232 | 110655.0 |
| type i-f crispr-associated endonuclease cas1 | D2927_01695 | Not Available | Negative | 399229 - 400218 | 37612.9 |
| wyl domain-containing protein | D2927_01700 | Not Available | Negative | 400333 - 401127 | 30875.6 |
| hcp family type vi secretion system effector | D2927_01705 | Not Available | Positive | 401543 - 402061 | 19087.4 |
| type vi secretion system tip protein vgrg | D2927_01710 | Not Available | Positive | 402188 - 404164 | 72497.0 |
| duf4123 domain-containing protein | D2927_01715 | Not Available | Positive | 404164 - 404952 | 30729.0 |
| hypothetical protein | D2927_01720 | Not Available | Positive | 404942 - 406552 | 59094.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Cholera | Causes | PMC10103850 |
| Ear infections | Causes | PMC10103850 |
| Wound infections | Causes | PMC10103850 |
| Septicaemia | Causes | PMC10103850 |
| Gastrointestinal infections | Causes | PMC10103850 |
| Necrotizing fasciitis | Causes | PMC10103850 |
| Vibriosis | Causes | PMC10472736 |
| Pneumonia | Causes | PMC12801787 |
| Gastroenteritis | Causes | PMC12801787 |
| Sinusitis | Causes | PMC12801787 |






