Vibrio cholerae strain VcCHNf6

Gram-negativeRodNon-motileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio cholerae strain VcCHNf6 is a Gram-negative, rod-shaped bacterium that exhibits several notable traits. It is a facultative anaerobe, indicating its ability to thrive in both aerobic and anaerobic environments, and it is classified as a heterotroph, relying on organic compounds for energy. This strain is characterized by its free-living nature and can be found in various habitats, including aquatic environments where it may interact with different hosts. The strain possesses a single replicon and is surrounded by two membranes, a characteristic feature of Gram-negative bacteria. While VcCHNf6 does not exhibit mobility, it does have flagella, which can play a role in its environmental interactions. In terms of temperature preferences, VcCHNf6 is mesophilic, with an optimal growth temperature of around 20°C. This temperature range suggests that it is well-adapted to moderate environmental conditions. The bacterium has a broad host range, affecting Homo sapiens, Mollusca, Mammalia, and the shrimp species Penaeus vannamei. Health effects associated with VcCHNf6 are significant, as they include severe conditions such as cholera, pneumonia, gastrointestinal infections, and sepsis, among others. This pathogenicity highlights the strain's potential impact on human health, particularly in relation to cholera disease and associated diarrheal infections. The ecological insight from these traits suggests that the strain's ability to thrive in diverse environments and its interactions with various hosts could contribute to its persistence and potential for outbreaks in human populations.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio cholerae
Strainstrain VcCHNf6

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Vibrio cholerae strain VcCHNf6
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature20
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Homo sapiens, Mollusca, Mammalia
Cell arrangementSingles
SporulationNonsporulating
Energy sourceHeterotroph
PathogenicityHuman

Genome Summary

Vibrio cholerae strain VcCHNf6 Scaffold95, whole genome shotgun

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lipid asymmetry maintenance abc transporter permease subunit mlaeD2927_10090Not AvailableNegative2242109 - 224288527627.4
phospholipid abc transporter atp-binding protein mlafD2927_10095Not AvailableNegative2242890 - 224369329531.1
hypothetical proteinD2927_10100Not AvailableNegative2243821 - 22440127223.1
calcium/sodium antiporterD2927_10105Not AvailablePositive2244250 - 224524834772.0
arabinose-5-phosphate isomerase kdsdD2927_10110Not AvailablePositive2245298 - 224627834854.0
3-deoxy-manno-octulosonate-8-phosphatase kdscD2927_10115Not AvailablePositive2246278 - 224683520347.7
lps export abc transporter periplasmic protein lptcD2927_10120Not AvailablePositive2246832 - 224739521385.4
lipopolysaccharide transport periplasmic protein lptaD2927_10125Not AvailablePositive2247331 - 224787020183.3
lipopolysaccharide abc transporter atp-binding proteinD2927_10130Not AvailablePositive2247873 - 224859826951.7
rna polymerase factor sigma-54D2927_10135Not AvailablePositive2248654 - 225011755441.5

Displaying genes 2021 – 2030 of 3746 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
CholeraCausesPMC10103850
Ear infectionsCausesPMC10103850
Wound infectionsCausesPMC10103850
SepticaemiaCausesPMC10103850
Gastrointestinal infectionsCausesPMC10103850
Necrotizing fasciitisCausesPMC10103850
VibriosisCausesPMC10472736
PneumoniaCausesPMC12801787
GastroenteritisCausesPMC12801787
SinusitisCausesPMC12801787

Displaying health effects 1 – 10 of 38 in total