Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l15 | D1781_02615 | Not Available | Positive | 506735 - 507232 | 17323.0 |
| preprotein translocase subunit secy | D1781_02620 | Not Available | Positive | 507333 - 508658 | 48055.4 |
| adenylate kinase | D1781_02625 | Not Available | Positive | 508664 - 509239 | 20612.5 |
| translation initiation factor if-1 | D1781_02630 | Not Available | Positive | 509449 - 509670 | 8392.38 |
| 50s ribosomal protein l36 | D1781_02635 | Not Available | Positive | 509754 - 509870 | 4409.64 |
| 30s ribosomal protein s13 | D1781_02640 | Not Available | Positive | 510025 - 510405 | 14175.2 |
| 30s ribosomal protein s11 | D1781_02645 | Not Available | Positive | 510443 - 510844 | 13928.7 |
| dna-directed rna polymerase subunit alpha | D1781_02650 | Not Available | Positive | 510971 - 511960 | 36063.6 |
| 50s ribosomal protein l17 | D1781_02655 | Not Available | Positive | 511963 - 512571 | 21474.3 |
| atp-dependent dna ligase | D1781_02660 | Not Available | Positive | 512650 - 513675 | 37240.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
